Faculty

Russell Takeshi Shinohara, Ph.D.

Professor of Biostatistics and Epidemiology

Department: Biostatistics and Epidemiology

Graduate Group Affiliations

Contact information

Center for Clinical Epidemiology and Biostatistics
Department of Biostatistics, Epidemiology and Informatics
Perelman School of Medicine
University of Pennsylvania
217 Blockley Hall
423 Guardian Drive
Philadelphia, PA 19104-6021

Office: 215-746-1090
Fax: 215-573-1050

Email:
rshi@pennmedicine.upenn.edu

Education
Honors BSc (Probability and Statistics)
McGill University, 2006.
MSc (Mathematics and Statistics)
McGill University, 2007.
PhD (Biostatistics)
The Johns Hopkins University, 2012.

Links
Penn Statistical Imaging and Visualization Endeavor

Permanent link

> Perelman School of Medicine > Faculty > Details

Selected Publications

Baller EB, Cooper EC, Schindler MK, Bar-Or A, Fox MD, Shinohara RT, Satterthwaite TD: Depression as a disease of white matter network disruption: Learning from Multiple Sclerosis. Biological Psychiatry 99(12): 1088-1099, June 2026.

Baheti B, Chakrabarty S, Akbari H, Bilello M, Wiestler B, Schwarting J, Calabrese E, Rudie J, Abidi S, Mousa M, Villanueva-Meyer J, Fields BKK, Kofler F, Shinohara RT, Iglesias JE, Mok TCW, Chung ACS, Wodzinski M, Jurgas A, Marini N, Atzori M, Muller H, Großbrohmer C, Siebert H, Hansen L, Heinrich MP, Canalini L, Klein J, Gerken A, Heldmann S, Hering A, Hahn HK, Meng M, Bi L, Feng D, Kim J, Zeineldin RA, Karar ME, Mathis-Ullrich F, Burgert O, Abderezaei J, Pionteck A, Chopra A, Kurt M, Yan K, Yan Y, Tang Z, Ma J, Nasser SA, Kurian NC, Meena M, Shamsi S, Sethi A, Tustison NJ, Avants BB, Cook P, Gee JC, Tian L, Greer H, Niethammer M, Hoopes A, Hoffmann M, Dalca AV, Christodoulidis S, Estienne T, Vakalopoulou M, Paragios N, Marcus DS, Davatzikos C, Sotiras A, Menze B, Bakas S, Waldmannstetter D: The Brain Tumor Sequence Registration (BraTS-Reg) Challenge for Establishing Correspondence Between Pre-Operative and Follow-up MRI Scans of Diffuse Glioma Patients. Scientific Reports In press 2026.

Jung B, Schmitt JE, Seidlitz J, Schabdach J, Karandikar S, Crowley TB, Dorfschmidt L, Mandal AS, Zimmerman D, Williams RMS, Prem S, Levitis E, Gardner M, Cyr K, Padmanabhan V, Taylor JH, Ruparel K, Boen R, Bearden CE, Ching CRK, Pasaniuc B, Master SR, Anderson S, McGinn D, Zackai E, Emanuel B, Hopkins S, Chadehumbe M, Low KJ, Cole TJ, Bethlehem RAI, Shinohara RT, Gaynor JW, Roalf DR, Gur RE, McDonald-McGinn DM, Alexander-Bloch A: Charting Brain Structure in 22q11.2 Deletion Syndrome with Clinical Neuroimaging. Genome Medicine In press 2026.

Ahmed D, Diaz-Arrastia R, Naj AC, Shinohara RT, Gugger JJ, Gottesman RF, Ballantyne C, Schneider ALC, Johnson EL: Associations of Interleukin-18 and Interleukin-6 with Epilepsy in the ARIC Study. Neurology In press 2026.

Jacobs PS, Spangler B, Bahktiar N, Elkady A, Wilson N, Swain A, Horwath E, Awad M, Yamashita L, Shinohara RT, Thebault S, Bar-Or A, Detre J, Rudko D, Schindler MK, Reddy R: Altered Glutamate Homeostasis in Paramagnetic Rim Lesions of Patients with Multiple Sclerosis Imaging Neuroscience. Imaging Neuroscience In press 2026.

Shafiei G, Bagautdinova J, Sydnor VJ, Bassett DS, Barch DM, Cieslak M, Fan Y, Flook E, Franco AR, Kiar G, Luo AC, Milham MP, Parkes L, Salo T, Somerville LH, Tong TT, Shinohara RT, Satterthwaite TD: Intrinsic timescale develops hierarchically from sensorimotor to association cortex in youth and stabilizes in adulthood. PLOS Biology In press 2026.

Sevchik BL, Shafiei G, Murtha K, Linguiti S, Brodrick L, Brook JBH, Cieslak M, Flook E, Mehta K, Meisler SL, Rupare! K, Rush S, Salo 1, Singleton SP, Tong TT, Salunke M, Bassett DS, Calkins ME, Elliott MA, Gur RE, Gur RC, Moore TM, Scott JC, Shinohara RT, Tidall MD, Wolf DH, Roalf DR, Satterthwaite TD: A longitudinal data resource to study brain development and transdiagnostic variation in executive function. Scientific Data In press 2026.

Sevchik BL, Shafiei G, Murtha K, Linguiti S, Brodrick L, Brook JBH, Cieslak M, Flook E, Mehta K, Meisler SL, Rupare! K, Rush S, Salo 1, Singleton SP, Tong TT, Salunke M, Bassett DS, Calkins ME, Elliott MA, Gur RE, Gur RC, Moore TM, Scott JC, Shinohara RT, Tidall MD, Wolf DH, Roalf DR, Satterthwaite TD: A longitudinal data resource to study brain development and transdiagnostic variation in executive function. Scientific Data In press 2026.

Rubau-Apa N, Hayes C, Francisco A, Rush S, Rana H, Islam M, Hunter L, Pritschet L, Salo T, Senapati S, Hantsoo L, Indrakanti D, Beydler EM, Baller EB, Barzilay R, Calkins ME, Cieslak M, Detre JA, Dhaliwal S, Elliott MA, Huang H, Keller AS, Kirwan CB, Kishton R, Moore TM, Kornfield SL, Scott JC, Shinohara RT, Taso M, Tisdall MD, Vossough A, White LK, Zafman K, Wolf DH, Roalf DR, Shanmugan S: The PMADS Project: A Longitudinal Multimodal Cohort Study to Understand Risk for Perinatal Mood and Anxiety Disorders. BMC Psychiatry In press 2026.

Quah B, Nair SM, Renner B, Gao C, Jin J, Han F, Luskin E, Silemek AH, Binesh N, Li D, Kaisey M, Reich D, Sicotte N, Shinohara RT, Ontaneda D, Al-Louzi O, Huang X, Maya M, Sati P: Fast submillimeter whole-brain T2*-weighted imaging using 3D-EPI with CAIPIRINHA and deep-learning denoising at 3T. Magnetic Resonance in Medicine In Press 2026.